Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clrn1Q8K445 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clrn1Q8K445 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clrn1Q8K445 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Gm13158-201ENSMUST00000122007 736 ntBASIC16.66■□□□□ 0.26
Clrn1Q8K445 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.66■□□□□ 0.26
Clrn1Q8K445 Gm10138-203ENSMUST00000206952 366 ntBASIC16.66■□□□□ 0.26
Clrn1Q8K445 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clrn1Q8K445 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.65■□□□□ 0.26
Clrn1Q8K445 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.65■□□□□ 0.26
Clrn1Q8K445 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clrn1Q8K445 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.64■□□□□ 0.26
Clrn1Q8K445 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.64■□□□□ 0.25
Clrn1Q8K445 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.64■□□□□ 0.25
Clrn1Q8K445 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Clrn1Q8K445 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.63■□□□□ 0.25
Clrn1Q8K445 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn1Q8K445 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Gm15375-201ENSMUST00000119510 849 ntBASIC16.62■□□□□ 0.25
Clrn1Q8K445 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Gm10653-202ENSMUST00000139570 835 ntBASIC16.62■□□□□ 0.25
Clrn1Q8K445 Mir2861-201ENSMUST00000175539 82 ntBASIC16.62■□□□□ 0.25
Clrn1Q8K445 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Idnk-204ENSMUST00000226010 1898 ntBASIC16.62■□□□□ 0.25
Clrn1Q8K445 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn1Q8K445 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms