Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shtn1Q8K2Q9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Shtn1Q8K2Q9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.79■□□□□ 0.92
Shtn1Q8K2Q9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shtn1Q8K2Q9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
Shtn1Q8K2Q9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.78■□□□□ 0.92
Shtn1Q8K2Q9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shtn1Q8K2Q9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.78■□□□□ 0.92
Shtn1Q8K2Q9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.78■□□□□ 0.92
Shtn1Q8K2Q9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shtn1Q8K2Q9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shtn1Q8K2Q9 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.78■□□□□ 0.92
Shtn1Q8K2Q9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Shtn1Q8K2Q9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Gm13401-201ENSMUST00000117074 291 ntBASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Gm24841-201ENSMUST00000158676 357 ntBASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Shtn1Q8K2Q9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Gm27389-201ENSMUST00000183622 195 ntBASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Gm44771-201ENSMUST00000206975 626 ntBASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shtn1Q8K2Q9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shtn1Q8K2Q9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Shtn1Q8K2Q9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Shtn1Q8K2Q9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Shtn1Q8K2Q9 Gm18669-201ENSMUST00000216049 778 ntBASIC20.75■□□□□ 0.91
Shtn1Q8K2Q9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shtn1Q8K2Q9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shtn1Q8K2Q9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shtn1Q8K2Q9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shtn1Q8K2Q9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Gm7153-201ENSMUST00000117092 455 ntBASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Shtn1Q8K2Q9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Gm13474-201ENSMUST00000122466 815 ntBASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Gm9013-201ENSMUST00000132939 882 ntBASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shtn1Q8K2Q9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Mir1668-201ENSMUST00000184114 107 ntBASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Gm7213-201ENSMUST00000215977 950 ntBASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shtn1Q8K2Q9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms