Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1aQ8CIG0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1aQ8CIG0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.94■□□□□ 0.78
Depdc1aQ8CIG0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.94■□□□□ 0.78
Depdc1aQ8CIG0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1aQ8CIG0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1aQ8CIG0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Depdc1aQ8CIG0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Gm7638-201ENSMUST00000121348 967 ntBASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Mir8112-201ENSMUST00000184382 131 ntBASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Depdc1aQ8CIG0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Depdc1aQ8CIG0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1aQ8CIG0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1aQ8CIG0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.9■□□□□ 0.78
Depdc1aQ8CIG0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1aQ8CIG0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.9■□□□□ 0.78
Depdc1aQ8CIG0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1aQ8CIG0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Depdc1aQ8CIG0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Depdc1aQ8CIG0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Depdc1aQ8CIG0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Depdc1aQ8CIG0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Gm7791-201ENSMUST00000219066 539 ntBASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.88■□□□□ 0.77
Depdc1aQ8CIG0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Depdc1aQ8CIG0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms