Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm13158-201ENSMUST00000122007 736 ntBASIC17.99■□□□□ 0.47
CopaQ8CIE6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopaQ8CIE6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CopaQ8CIE6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.98■□□□□ 0.47
CopaQ8CIE6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.98■□□□□ 0.47
CopaQ8CIE6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.98■□□□□ 0.47
CopaQ8CIE6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CopaQ8CIE6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Flg-201ENSMUST00000050758 1488 ntBASIC17.97■□□□□ 0.47
CopaQ8CIE6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Gm11927-201ENSMUST00000118472 759 ntBASIC17.97■□□□□ 0.47
CopaQ8CIE6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Gm6576-201ENSMUST00000169678 883 ntBASIC17.97■□□□□ 0.47
CopaQ8CIE6 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.97■□□□□ 0.47
CopaQ8CIE6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.97■□□□□ 0.47
CopaQ8CIE6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.97■□□□□ 0.47
CopaQ8CIE6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.97■□□□□ 0.47
CopaQ8CIE6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CopaQ8CIE6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.96■□□□□ 0.47
CopaQ8CIE6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Mir7071-201ENSMUST00000184847 69 ntBASIC17.96■□□□□ 0.47
CopaQ8CIE6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.96■□□□□ 0.47
CopaQ8CIE6 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.96■□□□□ 0.47
CopaQ8CIE6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CopaQ8CIE6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CopaQ8CIE6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CopaQ8CIE6 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.95■□□□□ 0.46
CopaQ8CIE6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.95■□□□□ 0.46
CopaQ8CIE6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Gm15378-201ENSMUST00000121894 207 ntBASIC17.95■□□□□ 0.46
CopaQ8CIE6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.95■□□□□ 0.46
CopaQ8CIE6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CopaQ8CIE6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CopaQ8CIE6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CopaQ8CIE6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms