Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rftn2Q8CHX7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rftn2Q8CHX7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Rftn2Q8CHX7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rftn2Q8CHX7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rftn2Q8CHX7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.77■□□□□ 0.6
Rftn2Q8CHX7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rftn2Q8CHX7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.77■□□□□ 0.6
Rftn2Q8CHX7 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.77■□□□□ 0.6
Rftn2Q8CHX7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rftn2Q8CHX7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rftn2Q8CHX7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Rftn2Q8CHX7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Gm7889-201ENSMUST00000185591 958 ntBASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rftn2Q8CHX7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Mir8112-201ENSMUST00000184382 131 ntBASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rftn2Q8CHX7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Gm10231-201ENSMUST00000181584 441 ntBASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Gm7977-201ENSMUST00000193787 748 ntBASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Gm37025-201ENSMUST00000195159 829 ntBASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Gm10175-202ENSMUST00000208752 441 ntBASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rftn2Q8CHX7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rftn2Q8CHX7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rftn2Q8CHX7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rftn2Q8CHX7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rftn2Q8CHX7 Gm7638-201ENSMUST00000121348 967 ntBASIC18.72■□□□□ 0.59
Rftn2Q8CHX7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.72■□□□□ 0.59
Rftn2Q8CHX7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rftn2Q8CHX7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rftn2Q8CHX7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms