Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rab43Q8CG50 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Golph3-205ENSMUST00000228671 2842 ntBASIC17.19■□□□□ 0.34
Rab43Q8CG50 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Gm10819-201ENSMUST00000099988 561 ntBASIC17.19■□□□□ 0.34
Rab43Q8CG50 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab43Q8CG50 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rab43Q8CG50 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Gm22697-201ENSMUST00000175194 63 ntBASIC17.18■□□□□ 0.34
Rab43Q8CG50 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab43Q8CG50 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rab43Q8CG50 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rab43Q8CG50 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Gm16061-201ENSMUST00000122167 857 ntBASIC17.17■□□□□ 0.34
Rab43Q8CG50 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Tgds-204ENSMUST00000228543 1594 ntBASIC17.17■□□□□ 0.34
Rab43Q8CG50 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Rab43Q8CG50 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.17■□□□□ 0.34
Rab43Q8CG50 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab43Q8CG50 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab43Q8CG50 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.16■□□□□ 0.34
Rab43Q8CG50 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab43Q8CG50 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rab43Q8CG50 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.15■□□□□ 0.34
Rab43Q8CG50 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Gm13401-201ENSMUST00000117074 291 ntBASIC17.15■□□□□ 0.34
Rab43Q8CG50 Gm7638-201ENSMUST00000121348 967 ntBASIC17.15■□□□□ 0.34
Rab43Q8CG50 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Gm24841-201ENSMUST00000158676 357 ntBASIC17.15■□□□□ 0.34
Rab43Q8CG50 Gm6345-202ENSMUST00000180900 204 ntBASIC17.15■□□□□ 0.34
Rab43Q8CG50 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.15■□□□□ 0.34
Rab43Q8CG50 Gm29791-202ENSMUST00000207888 369 ntBASIC17.15■□□□□ 0.34
Rab43Q8CG50 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rab43Q8CG50 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms