Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.87■■□□□ 1.09
Smc5Q8CG46 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc5Q8CG46 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc5Q8CG46 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc5Q8CG46 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smc5Q8CG46 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc5Q8CG46 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc5Q8CG46 Gm44549-201ENSMUST00000208351 577 ntBASIC21.86■■□□□ 1.09
Smc5Q8CG46 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc5Q8CG46 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smc5Q8CG46 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc5Q8CG46 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.86■■□□□ 1.09
Smc5Q8CG46 Gm45774-201ENSMUST00000211992 2665 ntBASIC21.86■■□□□ 1.09
Smc5Q8CG46 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Smc5Q8CG46 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smc5Q8CG46 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Smc5Q8CG46 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.85■■□□□ 1.09
Smc5Q8CG46 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Smc5Q8CG46 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc5Q8CG46 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc5Q8CG46 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc5Q8CG46 Gm7290-201ENSMUST00000104990 617 ntBASIC21.84■■□□□ 1.09
Smc5Q8CG46 Gm12918-201ENSMUST00000120234 636 ntBASIC21.84■■□□□ 1.09
Smc5Q8CG46 Gm15710-201ENSMUST00000121821 636 ntBASIC21.84■■□□□ 1.09
Smc5Q8CG46 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Smc5Q8CG46 Gm26571-201ENSMUST00000181399 666 ntBASIC21.84■■□□□ 1.09
Smc5Q8CG46 Gm5075-201ENSMUST00000196916 622 ntBASIC21.84■■□□□ 1.09
Smc5Q8CG46 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc5Q8CG46 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.84■■□□□ 1.09
Smc5Q8CG46 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.84■■□□□ 1.09
Smc5Q8CG46 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smc5Q8CG46 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc5Q8CG46 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Smc5Q8CG46 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smc5Q8CG46 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc5Q8CG46 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc5Q8CG46 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Smc5Q8CG46 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc5Q8CG46 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smc5Q8CG46 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Smc5Q8CG46 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Smc5Q8CG46 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc5Q8CG46 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Smc5Q8CG46 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Smc5Q8CG46 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smc5Q8CG46 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc5Q8CG46 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Gm13401-201ENSMUST00000117074 291 ntBASIC21.81■■□□□ 1.08
Smc5Q8CG46 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc5Q8CG46 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Smc5Q8CG46 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc5Q8CG46 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc5Q8CG46 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc5Q8CG46 Haglr-201ENSMUST00000100000 2085 ntBASIC21.8■■□□□ 1.08
Smc5Q8CG46 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc5Q8CG46 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc5Q8CG46 Gm10418-201ENSMUST00000100943 576 ntBASIC21.8■■□□□ 1.08
Smc5Q8CG46 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc5Q8CG46 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.8■■□□□ 1.08
Smc5Q8CG46 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Smc5Q8CG46 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc5Q8CG46 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Smc5Q8CG46 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Smc5Q8CG46 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Smc5Q8CG46 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms