Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nup88Q8CEC0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup88Q8CEC0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.79■□□□□ 0.92
Nup88Q8CEC0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup88Q8CEC0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup88Q8CEC0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Gm6576-201ENSMUST00000169678 883 ntBASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nup88Q8CEC0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup88Q8CEC0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup88Q8CEC0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup88Q8CEC0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup88Q8CEC0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Nup88Q8CEC0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.77■□□□□ 0.92
Nup88Q8CEC0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nup88Q8CEC0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.77■□□□□ 0.92
Nup88Q8CEC0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup88Q8CEC0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nup88Q8CEC0 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.76■□□□□ 0.91
Nup88Q8CEC0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nup88Q8CEC0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Gm2399-201ENSMUST00000104944 225 ntBASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Gm10698-201ENSMUST00000182663 604 ntBASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.75■□□□□ 0.91
Nup88Q8CEC0 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.75■□□□□ 0.91
Nup88Q8CEC0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nup88Q8CEC0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nup88Q8CEC0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms