Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Gm13148-201ENSMUST00000118892 745 ntBASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vcpip1Q8CDG3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Mir5133-201ENSMUST00000174955 77 ntBASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vcpip1Q8CDG3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Gm26524-201ENSMUST00000192339 390 ntBASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Gm44549-201ENSMUST00000208351 577 ntBASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vcpip1Q8CDG3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Gm38285-201ENSMUST00000192928 922 ntBASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vcpip1Q8CDG3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Gm22240-201ENSMUST00000175225 82 ntBASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vcpip1Q8CDG3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms