Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa4Q8CA71 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa4Q8CA71 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.58■□□□□ 0.89
Shisa4Q8CA71 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa4Q8CA71 Gm37055-201ENSMUST00000191866 133 ntBASIC20.58■□□□□ 0.89
Shisa4Q8CA71 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa4Q8CA71 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa4Q8CA71 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa4Q8CA71 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa4Q8CA71 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Shisa4Q8CA71 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.58■□□□□ 0.89
Shisa4Q8CA71 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa4Q8CA71 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.56■□□□□ 0.88
Shisa4Q8CA71 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa4Q8CA71 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa4Q8CA71 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Shisa4Q8CA71 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa4Q8CA71 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa4Q8CA71 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa4Q8CA71 Gm9987-201ENSMUST00000069768 567 ntBASIC20.56■□□□□ 0.88
Shisa4Q8CA71 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa4Q8CA71 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Shisa4Q8CA71 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa4Q8CA71 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa4Q8CA71 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Gm3375-201ENSMUST00000203929 796 ntBASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.55■□□□□ 0.88
Shisa4Q8CA71 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa4Q8CA71 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa4Q8CA71 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Gm12085-201ENSMUST00000119263 940 ntBASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Gm24841-201ENSMUST00000158676 357 ntBASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.53■□□□□ 0.88
Shisa4Q8CA71 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa4Q8CA71 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa4Q8CA71 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa4Q8CA71 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa4Q8CA71 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa4Q8CA71 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa4Q8CA71 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa4Q8CA71 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa4Q8CA71 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms