Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp20Q8C6M1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp20Q8C6M1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp20Q8C6M1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.48■□□□□ 0.71
Usp20Q8C6M1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp20Q8C6M1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp20Q8C6M1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp20Q8C6M1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp20Q8C6M1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp20Q8C6M1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Gm6659-201ENSMUST00000174752 547 ntBASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Usp20Q8C6M1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.46■□□□□ 0.71
Usp20Q8C6M1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Gm38027-201ENSMUST00000192315 235 ntBASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Gm18959-201ENSMUST00000208954 655 ntBASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp20Q8C6M1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp20Q8C6M1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp20Q8C6M1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp20Q8C6M1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp20Q8C6M1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
Usp20Q8C6M1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp20Q8C6M1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp20Q8C6M1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp20Q8C6M1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms