Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Fam78aQ8C552 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.75■□□□□ 0.59
Fam78aQ8C552 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.75■□□□□ 0.59
Fam78aQ8C552 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Fam78aQ8C552 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.74■□□□□ 0.59
Fam78aQ8C552 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Fam78aQ8C552 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam78aQ8C552 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam78aQ8C552 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.73■□□□□ 0.59
Fam78aQ8C552 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Fam78aQ8C552 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.73■□□□□ 0.59
Fam78aQ8C552 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam78aQ8C552 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam78aQ8C552 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Fam78aQ8C552 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Gm13474-201ENSMUST00000122466 815 ntBASIC18.72■□□□□ 0.59
Fam78aQ8C552 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.72■□□□□ 0.59
Fam78aQ8C552 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Fam78aQ8C552 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Fam78aQ8C552 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Fam78aQ8C552 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.71■□□□□ 0.59
Fam78aQ8C552 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Gm9731-201ENSMUST00000209480 747 ntBASIC18.7■□□□□ 0.58
Fam78aQ8C552 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Fam78aQ8C552 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fam78aQ8C552 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Fam78aQ8C552 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Fam78aQ8C552 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fam78aQ8C552 Gm21559-201ENSMUST00000220638 855 ntBASIC18.69■□□□□ 0.58
Fam78aQ8C552 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms