Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Eri3Q8C460 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.78■□□□□ 0.28
Eri3Q8C460 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Eri3Q8C460 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Eri3Q8C460 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Eri3Q8C460 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Eri3Q8C460 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Eri3Q8C460 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Eri3Q8C460 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Eri3Q8C460 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.78■□□□□ 0.28
Eri3Q8C460 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Eri3Q8C460 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Eri3Q8C460 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.78■□□□□ 0.28
Eri3Q8C460 Idnk-204ENSMUST00000226010 1898 ntBASIC16.78■□□□□ 0.28
Eri3Q8C460 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Eri3Q8C460 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Eri3Q8C460 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Eri3Q8C460 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Eri3Q8C460 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Eri3Q8C460 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Eri3Q8C460 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Eri3Q8C460 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Eri3Q8C460 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Eri3Q8C460 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Eri3Q8C460 Gm5643-201ENSMUST00000117081 966 ntBASIC16.77■□□□□ 0.28
Eri3Q8C460 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
Eri3Q8C460 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.77■□□□□ 0.28
Eri3Q8C460 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.77■□□□□ 0.28
Eri3Q8C460 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.77■□□□□ 0.28
Eri3Q8C460 Gm29791-202ENSMUST00000207888 369 ntBASIC16.77■□□□□ 0.28
Eri3Q8C460 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Eri3Q8C460 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Eri3Q8C460 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Eri3Q8C460 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Eri3Q8C460 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Eri3Q8C460 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Eri3Q8C460 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Eri3Q8C460 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.77■□□□□ 0.27
Eri3Q8C460 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Eri3Q8C460 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Gm10418-201ENSMUST00000100943 576 ntBASIC16.76■□□□□ 0.27
Eri3Q8C460 Gm13168-201ENSMUST00000121771 632 ntBASIC16.76■□□□□ 0.27
Eri3Q8C460 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.76■□□□□ 0.27
Eri3Q8C460 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.76■□□□□ 0.27
Eri3Q8C460 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Eri3Q8C460 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Eri3Q8C460 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Eri3Q8C460 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
Eri3Q8C460 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.75■□□□□ 0.27
Eri3Q8C460 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Eri3Q8C460 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Eri3Q8C460 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.75■□□□□ 0.27
Eri3Q8C460 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Eri3Q8C460 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Eri3Q8C460 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Eri3Q8C460 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Eri3Q8C460 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Eri3Q8C460 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.74■□□□□ 0.27
Eri3Q8C460 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Eri3Q8C460 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Eri3Q8C460 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.74■□□□□ 0.27
Eri3Q8C460 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Eri3Q8C460 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.74■□□□□ 0.27
Eri3Q8C460 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Eri3Q8C460 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Eri3Q8C460 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Eri3Q8C460 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Eri3Q8C460 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms