Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tsen54Q8C2A2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tsen54Q8C2A2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tsen54Q8C2A2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tsen54Q8C2A2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Tsen54Q8C2A2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tsen54Q8C2A2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Tsen54Q8C2A2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tsen54Q8C2A2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Tsen54Q8C2A2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Gm10493-201ENSMUST00000097270 612 ntBASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Tsen54Q8C2A2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.76□□□□□ -0.05
Tsen54Q8C2A2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Gm8495-201ENSMUST00000188740 694 ntBASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tsen54Q8C2A2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Gm5874-201ENSMUST00000096101 508 ntBASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tsen54Q8C2A2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.73□□□□□ -0.05
Tsen54Q8C2A2 Dancr-204ENSMUST00000132389 2347 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms