Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp43Q8BUM9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp43Q8BUM9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp43Q8BUM9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp43Q8BUM9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Usp43Q8BUM9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.86■□□□□ 0.45
Usp43Q8BUM9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Usp43Q8BUM9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Gm10653-202ENSMUST00000139570 835 ntBASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Usp43Q8BUM9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.84■□□□□ 0.45
Usp43Q8BUM9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp43Q8BUM9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp43Q8BUM9 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.83■□□□□ 0.45
Usp43Q8BUM9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.83■□□□□ 0.45
Usp43Q8BUM9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp43Q8BUM9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp43Q8BUM9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.83■□□□□ 0.44
Usp43Q8BUM9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.83■□□□□ 0.44
Usp43Q8BUM9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Usp43Q8BUM9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.83■□□□□ 0.44
Usp43Q8BUM9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp43Q8BUM9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp43Q8BUM9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp43Q8BUM9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp43Q8BUM9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Usp43Q8BUM9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms