Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cpne3Q8BT60 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Gm6211-202ENSMUST00000167849 925 ntBASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Gm8495-201ENSMUST00000188740 694 ntBASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne3Q8BT60 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Gm7290-201ENSMUST00000104990 617 ntBASIC17.02■□□□□ 0.32
Cpne3Q8BT60 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Gm12918-201ENSMUST00000120234 636 ntBASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Gm15710-201ENSMUST00000121821 636 ntBASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Gm5075-201ENSMUST00000196916 622 ntBASIC17.02■□□□□ 0.32
Cpne3Q8BT60 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne3Q8BT60 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.02■□□□□ 0.31
Cpne3Q8BT60 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne3Q8BT60 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne3Q8BT60 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne3Q8BT60 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne3Q8BT60 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne3Q8BT60 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne3Q8BT60 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cpne3Q8BT60 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17■□□□□ 0.31
Cpne3Q8BT60 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Cpne3Q8BT60 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Cpne3Q8BT60 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cpne3Q8BT60 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cpne3Q8BT60 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17■□□□□ 0.31
Cpne3Q8BT60 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17■□□□□ 0.31
Cpne3Q8BT60 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne3Q8BT60 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms