Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Gm7791-201ENSMUST00000219066 539 ntBASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scfd1Q8BRF7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scfd1Q8BRF7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Scfd1Q8BRF7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scfd1Q8BRF7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scfd1Q8BRF7 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.19■□□□□ 0.82
Scfd1Q8BRF7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scfd1Q8BRF7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Scfd1Q8BRF7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scfd1Q8BRF7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scfd1Q8BRF7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.19■□□□□ 0.82
Scfd1Q8BRF7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Mir5130-201ENSMUST00000175160 84 ntBASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Scfd1Q8BRF7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scfd1Q8BRF7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scfd1Q8BRF7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scfd1Q8BRF7 Gm6659-201ENSMUST00000174752 547 ntBASIC20.17■□□□□ 0.82
Scfd1Q8BRF7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scfd1Q8BRF7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Scfd1Q8BRF7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scfd1Q8BRF7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scfd1Q8BRF7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scfd1Q8BRF7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scfd1Q8BRF7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Gm37025-201ENSMUST00000195159 829 ntBASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Gm18032-201ENSMUST00000222541 538 ntBASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Scfd1Q8BRF7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Scfd1Q8BRF7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scfd1Q8BRF7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scfd1Q8BRF7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scfd1Q8BRF7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Scfd1Q8BRF7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Scfd1Q8BRF7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
Scfd1Q8BRF7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.15■□□□□ 0.82
Scfd1Q8BRF7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.15■□□□□ 0.82
Scfd1Q8BRF7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Scfd1Q8BRF7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scfd1Q8BRF7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.14■□□□□ 0.82
Scfd1Q8BRF7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scfd1Q8BRF7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Scfd1Q8BRF7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Gm9731-201ENSMUST00000209480 747 ntBASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Scfd1Q8BRF7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scfd1Q8BRF7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scfd1Q8BRF7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Scfd1Q8BRF7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scfd1Q8BRF7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Scfd1Q8BRF7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Scfd1Q8BRF7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms