Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Gm37722-201ENSMUST00000193757 208 ntBASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Col16a1Q8BLX7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 Actl10-202ENSMUST00000226583 1501 ntBASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
Col16a1Q8BLX7 Mir770-201ENSMUST00000103252 94 ntBASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Mzt1-203ENSMUST00000227948 952 ntBASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col16a1Q8BLX7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Idnk-204ENSMUST00000226010 1898 ntBASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC23.22■■□□□ 1.31
Col16a1Q8BLX7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col16a1Q8BLX7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
Col16a1Q8BLX7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Col16a1Q8BLX7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Col16a1Q8BLX7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC23.2■■□□□ 1.3
Col16a1Q8BLX7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Col16a1Q8BLX7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
Col16a1Q8BLX7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col16a1Q8BLX7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col16a1Q8BLX7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
Col16a1Q8BLX7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col16a1Q8BLX7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col16a1Q8BLX7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col16a1Q8BLX7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Gm35558-201ENSMUST00000222675 2219 ntBASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 AC164629.2-201ENSMUST00000217916 270 ntBASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col16a1Q8BLX7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Olfr129-201ENSMUST00000122318 993 ntBASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms