Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clrn3Q8BHH8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clrn3Q8BHH8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clrn3Q8BHH8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clrn3Q8BHH8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Clrn3Q8BHH8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.52■□□□□ 0.23
Clrn3Q8BHH8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.52■□□□□ 0.23
Clrn3Q8BHH8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clrn3Q8BHH8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.52■□□□□ 0.23
Clrn3Q8BHH8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clrn3Q8BHH8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.52■□□□□ 0.23
Clrn3Q8BHH8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clrn3Q8BHH8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clrn3Q8BHH8 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Dio3-201ENSMUST00000097228 1449 ntBASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clrn3Q8BHH8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clrn3Q8BHH8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms