Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1bQ8BH88 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1bQ8BH88 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1bQ8BH88 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1bQ8BH88 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1bQ8BH88 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.18■□□□□ 0.66
Depdc1bQ8BH88 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1bQ8BH88 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Depdc1bQ8BH88 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Depdc1bQ8BH88 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.18■□□□□ 0.66
Depdc1bQ8BH88 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Gm5643-201ENSMUST00000117081 966 ntBASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1bQ8BH88 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1bQ8BH88 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1bQ8BH88 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Depdc1bQ8BH88 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Depdc1bQ8BH88 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Depdc1bQ8BH88 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Depdc1bQ8BH88 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1bQ8BH88 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1bQ8BH88 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Depdc1bQ8BH88 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1bQ8BH88 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1bQ8BH88 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Depdc1bQ8BH88 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1bQ8BH88 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Depdc1bQ8BH88 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Gm2399-201ENSMUST00000104944 225 ntBASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1bQ8BH88 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1bQ8BH88 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1bQ8BH88 Gm18666-201ENSMUST00000190039 958 ntBASIC19.12■□□□□ 0.65
Depdc1bQ8BH88 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1bQ8BH88 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1bQ8BH88 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1bQ8BH88 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms