Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trnp1Q80ZI1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trnp1Q80ZI1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Trnp1Q80ZI1 Olfr129-201ENSMUST00000122318 993 ntBASIC19.95■□□□□ 0.78
Trnp1Q80ZI1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trnp1Q80ZI1 Gm5867-201ENSMUST00000063197 592 ntBASIC19.95■□□□□ 0.78
Trnp1Q80ZI1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trnp1Q80ZI1 Tgds-204ENSMUST00000228543 1594 ntBASIC19.95■□□□□ 0.78
Trnp1Q80ZI1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Gm28659-201ENSMUST00000188013 759 ntBASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trnp1Q80ZI1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trnp1Q80ZI1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trnp1Q80ZI1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trnp1Q80ZI1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trnp1Q80ZI1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trnp1Q80ZI1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trnp1Q80ZI1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trnp1Q80ZI1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.92■□□□□ 0.78
Trnp1Q80ZI1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trnp1Q80ZI1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Trnp1Q80ZI1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trnp1Q80ZI1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trnp1Q80ZI1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trnp1Q80ZI1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trnp1Q80ZI1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trnp1Q80ZI1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trnp1Q80ZI1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trnp1Q80ZI1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trnp1Q80ZI1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trnp1Q80ZI1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trnp1Q80ZI1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trnp1Q80ZI1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trnp1Q80ZI1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trnp1Q80ZI1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms