Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lrrtm4Q80XG9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Gm37055-201ENSMUST00000191866 133 ntBASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.18■□□□□ 0.34
Lrrtm4Q80XG9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Gm4974-201ENSMUST00000209974 875 ntBASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Timm23-208ENSMUST00000226683 750 ntBASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lrrtm4Q80XG9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lrrtm4Q80XG9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrtm4Q80XG9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms