Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf40bQ80W14 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf40bQ80W14 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf40bQ80W14 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf40bQ80W14 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf40bQ80W14 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf40bQ80W14 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf40bQ80W14 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf40bQ80W14 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Prpf40bQ80W14 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf40bQ80W14 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf40bQ80W14 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf40bQ80W14 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf40bQ80W14 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Prpf40bQ80W14 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf40bQ80W14 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf40bQ80W14 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf40bQ80W14 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf40bQ80W14 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf40bQ80W14 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf40bQ80W14 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.31■□□□□ 0.84
Prpf40bQ80W14 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Prpf40bQ80W14 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf40bQ80W14 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf40bQ80W14 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.3■□□□□ 0.84
Prpf40bQ80W14 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf40bQ80W14 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf40bQ80W14 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf40bQ80W14 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.3■□□□□ 0.84
Prpf40bQ80W14 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Prpf40bQ80W14 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf40bQ80W14 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Prpf40bQ80W14 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf40bQ80W14 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf40bQ80W14 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Gm45058-201ENSMUST00000205810 766 ntBASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf40bQ80W14 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Prpf40bQ80W14 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms