Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sh3tc2Q80VA5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Gm27463-201ENSMUST00000183569 57 ntBASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3tc2Q80VA5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Mir5130-201ENSMUST00000175160 84 ntBASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3tc2Q80VA5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3tc2Q80VA5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Gm14859-201ENSMUST00000117752 357 ntBASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Gm9103-201ENSMUST00000119371 405 ntBASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3tc2Q80VA5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Ank2-226ENSMUST00000189368 339 ntBASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3tc2Q80VA5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
Sh3tc2Q80VA5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sh3tc2Q80VA5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3tc2Q80VA5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3tc2Q80VA5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3tc2Q80VA5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms