Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vps13bQ80TY5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Vps13bQ80TY5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm24841-201ENSMUST00000158676 357 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44357-201ENSMUST00000195897 142 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm19658-201ENSMUST00000196231 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44367-201ENSMUST00000196836 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44350-201ENSMUST00000197197 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44390-201ENSMUST00000197533 144 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44313-201ENSMUST00000198018 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44486-201ENSMUST00000198508 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44454-201ENSMUST00000198541 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44314-201ENSMUST00000199263 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44394-201ENSMUST00000199558 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44484-201ENSMUST00000199873 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44466-201ENSMUST00000200264 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Gm44359-201ENSMUST00000200671 138 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vps13bQ80TY5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Gm11452-201ENSMUST00000122376 690 ntBASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Mir5126-201ENSMUST00000175513 77 ntBASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vps13bQ80TY5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Gm7063-201ENSMUST00000186840 981 ntBASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vps13bQ80TY5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Vps13bQ80TY5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC10.53□□□□□ -0.72
Vps13bQ80TY5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC10.53□□□□□ -0.72
Vps13bQ80TY5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.53□□□□□ -0.72
Vps13bQ80TY5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Vps13bQ80TY5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Vps13bQ80TY5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Vps13bQ80TY5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Vps13bQ80TY5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Vps13bQ80TY5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Vps13bQ80TY5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Vps13bQ80TY5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms