Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh19Q80TF3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Gm10517-202ENSMUST00000192970 758 ntBASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh19Q80TF3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh19Q80TF3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Gm3375-201ENSMUST00000203929 796 ntBASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh19Q80TF3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh19Q80TF3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Gm43799-201ENSMUST00000201845 579 ntBASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Gm29791-202ENSMUST00000207888 369 ntBASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Gm4974-201ENSMUST00000209974 875 ntBASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh19Q80TF3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms