Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.25■□□□□ 0.19
Pif1Q80SX8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.25■□□□□ 0.19
Pif1Q80SX8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pif1Q80SX8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.24■□□□□ 0.19
Pif1Q80SX8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.24■□□□□ 0.19
Pif1Q80SX8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pif1Q80SX8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
Pif1Q80SX8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.23■□□□□ 0.19
Pif1Q80SX8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pif1Q80SX8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.22■□□□□ 0.19
Pif1Q80SX8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pif1Q80SX8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Gm23634-201ENSMUST00000175071 91 ntBASIC16.22■□□□□ 0.19
Pif1Q80SX8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.22■□□□□ 0.19
Pif1Q80SX8 Gm45058-201ENSMUST00000205810 766 ntBASIC16.22■□□□□ 0.19
Pif1Q80SX8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Grk6-206ENSMUST00000224995 2971 ntBASIC16.22■□□□□ 0.19
Pif1Q80SX8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pif1Q80SX8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pif1Q80SX8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Gm38027-201ENSMUST00000192315 235 ntBASIC16.21■□□□□ 0.19
Pif1Q80SX8 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.21■□□□□ 0.19
Pif1Q80SX8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pif1Q80SX8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms