Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdh8Q7TSK3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh8Q7TSK3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh8Q7TSK3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.43■□□□□ 0.38
Pcdh8Q7TSK3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh8Q7TSK3 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.43■□□□□ 0.38
Pcdh8Q7TSK3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh8Q7TSK3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdh8Q7TSK3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdh8Q7TSK3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Gm9987-201ENSMUST00000069768 567 ntBASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh8Q7TSK3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh8Q7TSK3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdh8Q7TSK3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdh8Q7TSK3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdh8Q7TSK3 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.39■□□□□ 0.38
Pcdh8Q7TSK3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Timm23-208ENSMUST00000226683 750 ntBASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh8Q7TSK3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Gm11643-201ENSMUST00000119578 864 ntBASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Gm43799-201ENSMUST00000201845 579 ntBASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Gm21814-202ENSMUST00000203277 873 ntBASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms