Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scn10aQ6QIY3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn10aQ6QIY3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn10aQ6QIY3 Gm27459-201ENSMUST00000184860 107 ntBASIC20.09■□□□□ 0.81
Scn10aQ6QIY3 Birc2-201ENSMUST00000054878 378 ntBASIC20.09■□□□□ 0.81
Scn10aQ6QIY3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Scn10aQ6QIY3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.09■□□□□ 0.81
Scn10aQ6QIY3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn10aQ6QIY3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn10aQ6QIY3 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.09■□□□□ 0.81
Scn10aQ6QIY3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn10aQ6QIY3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.08■□□□□ 0.81
Scn10aQ6QIY3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
Scn10aQ6QIY3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn10aQ6QIY3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn10aQ6QIY3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn10aQ6QIY3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scn10aQ6QIY3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.08■□□□□ 0.8
Scn10aQ6QIY3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn10aQ6QIY3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn10aQ6QIY3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn10aQ6QIY3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.08■□□□□ 0.8
Scn10aQ6QIY3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn10aQ6QIY3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn10aQ6QIY3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn10aQ6QIY3 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn10aQ6QIY3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn10aQ6QIY3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn10aQ6QIY3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Scn10aQ6QIY3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Scn10aQ6QIY3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn10aQ6QIY3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms