Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Gm6420-201ENSMUST00000193885 723 ntBASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scaf4Q6PFF0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Nespas-201ENSMUST00000143738 1083 ntBASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scaf4Q6PFF0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scaf4Q6PFF0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf4Q6PFF0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf4Q6PFF0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.4■□□□□ 0.38
Scaf4Q6PFF0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scaf4Q6PFF0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scaf4Q6PFF0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms