Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarcc2Q6PDG5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarcc2Q6PDG5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarcc2Q6PDG5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcc2Q6PDG5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.56■□□□□ 0.88
Smarcc2Q6PDG5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Mtag2-201ENSMUST00000058665 714 ntBASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcc2Q6PDG5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcc2Q6PDG5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
Smarcc2Q6PDG5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Gm29791-202ENSMUST00000207888 369 ntBASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smarcc2Q6PDG5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smarcc2Q6PDG5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcc2Q6PDG5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms