Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rundc3bQ6PDC0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rundc3bQ6PDC0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rundc3bQ6PDC0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rundc3bQ6PDC0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rundc3bQ6PDC0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rundc3bQ6PDC0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Golgb1-201ENSMUST00000023534 498 ntBASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rundc3bQ6PDC0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Gm11421-201ENSMUST00000122124 294 ntBASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Idnk-204ENSMUST00000226010 1898 ntBASIC16.63■□□□□ 0.25
Rundc3bQ6PDC0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rundc3bQ6PDC0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Gm45102-201ENSMUST00000207427 857 ntBASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rundc3bQ6PDC0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rundc3bQ6PDC0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms