Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim37Q6PCX9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim37Q6PCX9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim37Q6PCX9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim37Q6PCX9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.58■□□□□ 0.72
Trim37Q6PCX9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim37Q6PCX9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim37Q6PCX9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Trim37Q6PCX9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim37Q6PCX9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim37Q6PCX9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim37Q6PCX9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Gm18959-201ENSMUST00000208954 655 ntBASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Trim37Q6PCX9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Timm23-208ENSMUST00000226683 750 ntBASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim37Q6PCX9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Gm3375-201ENSMUST00000203929 796 ntBASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim37Q6PCX9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Gm12382-201ENSMUST00000122005 922 ntBASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim37Q6PCX9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Gm17971-201ENSMUST00000190239 806 ntBASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim37Q6PCX9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim37Q6PCX9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim37Q6PCX9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms