Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp50Q6P8X6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp50Q6P8X6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Usp50Q6P8X6 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.36■□□□□ 0.85
Usp50Q6P8X6 Gm30025-201ENSMUST00000218555 728 ntBASIC20.36■□□□□ 0.85
Usp50Q6P8X6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp50Q6P8X6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp50Q6P8X6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp50Q6P8X6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Gm10418-201ENSMUST00000100943 576 ntBASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Gm11539-201ENSMUST00000119837 557 ntBASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Gm13436-201ENSMUST00000120418 567 ntBASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp50Q6P8X6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp50Q6P8X6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.33■□□□□ 0.84
Usp50Q6P8X6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Usp50Q6P8X6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Usp50Q6P8X6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp50Q6P8X6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.32■□□□□ 0.84
Usp50Q6P8X6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp50Q6P8X6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp50Q6P8X6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp50Q6P8X6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp50Q6P8X6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.31■□□□□ 0.84
Usp50Q6P8X6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp50Q6P8X6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp50Q6P8X6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp50Q6P8X6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Gm38027-201ENSMUST00000192315 235 ntBASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Gm9987-201ENSMUST00000069768 567 ntBASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp50Q6P8X6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp50Q6P8X6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms