Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac4Q6NZM9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac4Q6NZM9 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.74■□□□□ 0.75
Hdac4Q6NZM9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Hdac4Q6NZM9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac4Q6NZM9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.74■□□□□ 0.75
Hdac4Q6NZM9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.74■□□□□ 0.75
Hdac4Q6NZM9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac4Q6NZM9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac4Q6NZM9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac4Q6NZM9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Hdac4Q6NZM9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Hdac4Q6NZM9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Gm29257-201ENSMUST00000186115 639 ntBASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.73■□□□□ 0.75
Hdac4Q6NZM9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Trmt13-210ENSMUST00000198454 880 ntBASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.72■□□□□ 0.75
Hdac4Q6NZM9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Gm18025-201ENSMUST00000221733 862 ntBASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac4Q6NZM9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Gm6576-201ENSMUST00000169678 883 ntBASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.7■□□□□ 0.74
Hdac4Q6NZM9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms