Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm4Q6IRU2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm4Q6IRU2 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm4Q6IRU2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tpm4Q6IRU2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tpm4Q6IRU2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tpm4Q6IRU2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tpm4Q6IRU2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms