Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.96■□□□□ 0.95
Best3Q6H1V1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best3Q6H1V1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best3Q6H1V1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best3Q6H1V1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best3Q6H1V1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.96■□□□□ 0.95
Best3Q6H1V1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Best3Q6H1V1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Best3Q6H1V1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.94■□□□□ 0.94
Best3Q6H1V1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.94■□□□□ 0.94
Best3Q6H1V1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Best3Q6H1V1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Gm27357-201ENSMUST00000183754 135 ntBASIC20.93■□□□□ 0.94
Best3Q6H1V1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Best3Q6H1V1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best3Q6H1V1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.92■□□□□ 0.94
Best3Q6H1V1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.92■□□□□ 0.94
Best3Q6H1V1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.92■□□□□ 0.94
Best3Q6H1V1 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.92■□□□□ 0.94
Best3Q6H1V1 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.92■□□□□ 0.94
Best3Q6H1V1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Best3Q6H1V1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Best3Q6H1V1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best3Q6H1V1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Best3Q6H1V1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.92■□□□□ 0.94
Best3Q6H1V1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Best3Q6H1V1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best3Q6H1V1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best3Q6H1V1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best3Q6H1V1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Best3Q6H1V1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Best3Q6H1V1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Best3Q6H1V1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Best3Q6H1V1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Best3Q6H1V1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Best3Q6H1V1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Best3Q6H1V1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Best3Q6H1V1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best3Q6H1V1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Mir8112-201ENSMUST00000184382 131 ntBASIC20.9■□□□□ 0.94
Best3Q6H1V1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Best3Q6H1V1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Best3Q6H1V1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Best3Q6H1V1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
Best3Q6H1V1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Best3Q6H1V1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Best3Q6H1V1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Best3Q6H1V1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.89■□□□□ 0.93
Best3Q6H1V1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Best3Q6H1V1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Best3Q6H1V1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Best3Q6H1V1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms