Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Irf4Q64287 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Irf4Q64287 Gm13836-201ENSMUST00000121159 501 ntBASIC17.32■□□□□ 0.36
Irf4Q64287 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.32■□□□□ 0.36
Irf4Q64287 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Irf4Q64287 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.32■□□□□ 0.36
Irf4Q64287 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Irf4Q64287 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Irf4Q64287 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Irf4Q64287 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Irf4Q64287 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Irf4Q64287 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Irf4Q64287 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Irf4Q64287 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Irf4Q64287 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Irf4Q64287 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Irf4Q64287 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Irf4Q64287 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.32■□□□□ 0.36
Irf4Q64287 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf4Q64287 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.31■□□□□ 0.36
Irf4Q64287 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf4Q64287 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf4Q64287 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf4Q64287 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Irf4Q64287 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.31■□□□□ 0.36
Irf4Q64287 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Irf4Q64287 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf4Q64287 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Irf4Q64287 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.31■□□□□ 0.36
Irf4Q64287 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.31■□□□□ 0.36
Irf4Q64287 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf4Q64287 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf4Q64287 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.31■□□□□ 0.36
Irf4Q64287 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Irf4Q64287 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf4Q64287 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.3■□□□□ 0.36
Irf4Q64287 Grk6-206ENSMUST00000224995 2971 ntBASIC17.3■□□□□ 0.36
Irf4Q64287 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf4Q64287 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Irf4Q64287 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Irf4Q64287 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.3■□□□□ 0.36
Irf4Q64287 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Irf4Q64287 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Irf4Q64287 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Irf4Q64287 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Irf4Q64287 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Irf4Q64287 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf4Q64287 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Irf4Q64287 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Irf4Q64287 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf4Q64287 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.29■□□□□ 0.36
Irf4Q64287 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Irf4Q64287 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.29■□□□□ 0.36
Irf4Q64287 Gm11539-201ENSMUST00000119837 557 ntBASIC17.29■□□□□ 0.36
Irf4Q64287 Gm13436-201ENSMUST00000120418 567 ntBASIC17.29■□□□□ 0.36
Irf4Q64287 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.29■□□□□ 0.36
Irf4Q64287 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Gm9987-201ENSMUST00000069768 567 ntBASIC17.29■□□□□ 0.36
Irf4Q64287 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Irf4Q64287 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Irf4Q64287 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf4Q64287 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Irf4Q64287 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Irf4Q64287 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.28■□□□□ 0.36
Irf4Q64287 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Irf4Q64287 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Irf4Q64287 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf4Q64287 Idnk-204ENSMUST00000226010 1898 ntBASIC17.28■□□□□ 0.36
Irf4Q64287 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms