Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Gm9731-201ENSMUST00000209480 747 ntBASIC14.75□□□□□ -0.05
Col7a1Q63870 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.75□□□□□ -0.05
Col7a1Q63870 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col7a1Q63870 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col7a1Q63870 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.74□□□□□ -0.05
Col7a1Q63870 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.74□□□□□ -0.05
Col7a1Q63870 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.74□□□□□ -0.05
Col7a1Q63870 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col7a1Q63870 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Col7a1Q63870 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Gm24841-201ENSMUST00000158676 357 ntBASIC14.73□□□□□ -0.05
Col7a1Q63870 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col7a1Q63870 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col7a1Q63870 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col7a1Q63870 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.72□□□□□ -0.05
Col7a1Q63870 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.72□□□□□ -0.05
Col7a1Q63870 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.72□□□□□ -0.05
Col7a1Q63870 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.72□□□□□ -0.05
Col7a1Q63870 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.72□□□□□ -0.05
Col7a1Q63870 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col7a1Q63870 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.72□□□□□ -0.05
Col7a1Q63870 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col7a1Q63870 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.72□□□□□ -0.05
Col7a1Q63870 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col7a1Q63870 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col7a1Q63870 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col7a1Q63870 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col7a1Q63870 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.71□□□□□ -0.05
Col7a1Q63870 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col7a1Q63870 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col7a1Q63870 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col7a1Q63870 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col7a1Q63870 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col7a1Q63870 Gm12644-201ENSMUST00000119935 606 ntBASIC14.71□□□□□ -0.06
Col7a1Q63870 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.71□□□□□ -0.06
Col7a1Q63870 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.71□□□□□ -0.06
Col7a1Q63870 Gm6296-201ENSMUST00000222599 943 ntBASIC14.71□□□□□ -0.06
Col7a1Q63870 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.71□□□□□ -0.06
Col7a1Q63870 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col7a1Q63870 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col7a1Q63870 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col7a1Q63870 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Col7a1Q63870 Gm13401-201ENSMUST00000117074 291 ntBASIC14.7□□□□□ -0.06
Col7a1Q63870 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col7a1Q63870 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col7a1Q63870 Gm6376-201ENSMUST00000209407 580 ntBASIC14.7□□□□□ -0.06
Col7a1Q63870 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col7a1Q63870 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col7a1Q63870 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col7a1Q63870 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col7a1Q63870 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col7a1Q63870 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.69□□□□□ -0.06
Col7a1Q63870 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.69□□□□□ -0.06
Col7a1Q63870 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col7a1Q63870 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col7a1Q63870 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col7a1Q63870 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col7a1Q63870 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Col7a1Q63870 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.69□□□□□ -0.06
Col7a1Q63870 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.69□□□□□ -0.06
Col7a1Q63870 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.69□□□□□ -0.06
Col7a1Q63870 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms