Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AtmQ62388 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.72■□□□□ 0.27
AtmQ62388 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AtmQ62388 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AtmQ62388 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AtmQ62388 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AtmQ62388 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AtmQ62388 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
AtmQ62388 Gm11452-201ENSMUST00000122376 690 ntBASIC16.72■□□□□ 0.27
AtmQ62388 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AtmQ62388 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.72■□□□□ 0.27
AtmQ62388 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AtmQ62388 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AtmQ62388 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.71■□□□□ 0.27
AtmQ62388 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AtmQ62388 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
AtmQ62388 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
AtmQ62388 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AtmQ62388 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AtmQ62388 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AtmQ62388 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AtmQ62388 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AtmQ62388 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
AtmQ62388 Gm7213-201ENSMUST00000215977 950 ntBASIC16.71■□□□□ 0.27
AtmQ62388 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AtmQ62388 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AtmQ62388 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AtmQ62388 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
AtmQ62388 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
AtmQ62388 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
AtmQ62388 Gm43575-201ENSMUST00000196420 516 ntBASIC16.71■□□□□ 0.26
AtmQ62388 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.71■□□□□ 0.26
AtmQ62388 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AtmQ62388 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.7■□□□□ 0.26
AtmQ62388 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AtmQ62388 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.7■□□□□ 0.26
AtmQ62388 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AtmQ62388 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.7■□□□□ 0.26
AtmQ62388 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AtmQ62388 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
AtmQ62388 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
AtmQ62388 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AtmQ62388 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
AtmQ62388 Actl10-202ENSMUST00000226583 1501 ntBASIC16.7■□□□□ 0.26
AtmQ62388 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AtmQ62388 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AtmQ62388 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.7■□□□□ 0.26
AtmQ62388 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AtmQ62388 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AtmQ62388 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AtmQ62388 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.69■□□□□ 0.26
AtmQ62388 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Auts2-212ENSMUST00000178555 309 ntBASIC16.69■□□□□ 0.26
AtmQ62388 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.69■□□□□ 0.26
AtmQ62388 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
AtmQ62388 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.69■□□□□ 0.26
AtmQ62388 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AtmQ62388 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AtmQ62388 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AtmQ62388 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.68■□□□□ 0.26
AtmQ62388 Gm45328-201ENSMUST00000210942 917 ntBASIC16.68■□□□□ 0.26
AtmQ62388 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AtmQ62388 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AtmQ62388 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.68■□□□□ 0.26
AtmQ62388 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AtmQ62388 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AtmQ62388 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AtmQ62388 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.68■□□□□ 0.26
AtmQ62388 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
AtmQ62388 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AtmQ62388 Gm4974-201ENSMUST00000209974 875 ntBASIC16.68■□□□□ 0.26
AtmQ62388 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
AtmQ62388 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AtmQ62388 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AtmQ62388 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AtmQ62388 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AtmQ62388 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AtmQ62388 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AtmQ62388 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AtmQ62388 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AtmQ62388 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
AtmQ62388 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AtmQ62388 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AtmQ62388 Gm10418-201ENSMUST00000100943 576 ntBASIC16.66■□□□□ 0.26
AtmQ62388 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms