Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox17Q61473 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox17Q61473 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox17Q61473 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.59■□□□□ 0.25
Sox17Q61473 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox17Q61473 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.59■□□□□ 0.25
Sox17Q61473 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox17Q61473 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sox17Q61473 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sox17Q61473 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox17Q61473 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox17Q61473 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox17Q61473 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox17Q61473 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox17Q61473 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox17Q61473 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox17Q61473 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox17Q61473 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Sox17Q61473 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox17Q61473 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Sox17Q61473 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox17Q61473 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox17Q61473 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox17Q61473 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.58■□□□□ 0.24
Sox17Q61473 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Sox17Q61473 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox17Q61473 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox17Q61473 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox17Q61473 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sox17Q61473 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.57■□□□□ 0.24
Sox17Q61473 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.57■□□□□ 0.24
Sox17Q61473 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Gm43017-201ENSMUST00000198296 752 ntBASIC16.57■□□□□ 0.24
Sox17Q61473 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Gm13241-201ENSMUST00000094493 780 ntBASIC16.57■□□□□ 0.24
Sox17Q61473 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sox17Q61473 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox17Q61473 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.56■□□□□ 0.24
Sox17Q61473 Reep4-203ENSMUST00000226563 1444 ntBASIC16.56■□□□□ 0.24
Sox17Q61473 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Gm13146-201ENSMUST00000118508 780 ntBASIC16.56■□□□□ 0.24
Sox17Q61473 Gm13534-201ENSMUST00000121169 513 ntBASIC16.56■□□□□ 0.24
Sox17Q61473 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.56■□□□□ 0.24
Sox17Q61473 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.56■□□□□ 0.24
Sox17Q61473 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sox17Q61473 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox17Q61473 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Sox17Q61473 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox17Q61473 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.55■□□□□ 0.24
Sox17Q61473 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Gm27454-201ENSMUST00000185090 204 ntBASIC16.55■□□□□ 0.24
Sox17Q61473 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sox17Q61473 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.55■□□□□ 0.24
Sox17Q61473 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sox17Q61473 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox17Q61473 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox17Q61473 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox17Q61473 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms