Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.12■□□□□ 0.01
Clns1aQ61189 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Clns1aQ61189 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Clns1aQ61189 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clns1aQ61189 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.12■□□□□ 0.01
Clns1aQ61189 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.11■□□□□ 0.01
Clns1aQ61189 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Clns1aQ61189 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.11■□□□□ 0.01
Clns1aQ61189 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.11■□□□□ 0.01
Clns1aQ61189 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.11■□□□□ 0.01
Clns1aQ61189 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.11■□□□□ 0.01
Clns1aQ61189 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Clns1aQ61189 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clns1aQ61189 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.1■□□□□ 0.01
Clns1aQ61189 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.1■□□□□ 0.01
Clns1aQ61189 Gm38205-201ENSMUST00000192243 258 ntBASIC15.1■□□□□ 0.01
Clns1aQ61189 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Clns1aQ61189 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clns1aQ61189 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.09■□□□□ 0.01
Clns1aQ61189 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Clns1aQ61189 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Clns1aQ61189 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.09■□□□□ 0.01
Clns1aQ61189 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Clns1aQ61189 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Clns1aQ61189 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.09■□□□□ 0.01
Clns1aQ61189 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.09■□□□□ 0.01
Clns1aQ61189 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Clns1aQ61189 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clns1aQ61189 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms