Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cln3Q61124 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cln3Q61124 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cln3Q61124 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cln3Q61124 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.4■□□□□ 0.7
Cln3Q61124 Gm37025-201ENSMUST00000195159 829 ntBASIC19.4■□□□□ 0.7
Cln3Q61124 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.4■□□□□ 0.7
Cln3Q61124 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.4■□□□□ 0.7
Cln3Q61124 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cln3Q61124 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cln3Q61124 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cln3Q61124 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cln3Q61124 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cln3Q61124 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cln3Q61124 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Cln3Q61124 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cln3Q61124 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cln3Q61124 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cln3Q61124 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cln3Q61124 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.39■□□□□ 0.69
Cln3Q61124 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.39■□□□□ 0.69
Cln3Q61124 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cln3Q61124 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.39■□□□□ 0.69
Cln3Q61124 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.39■□□□□ 0.69
Cln3Q61124 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.39■□□□□ 0.69
Cln3Q61124 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.39■□□□□ 0.69
Cln3Q61124 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cln3Q61124 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cln3Q61124 Gm10566-201ENSMUST00000086739 996 ntBASIC19.39■□□□□ 0.69
Cln3Q61124 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cln3Q61124 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cln3Q61124 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.39■□□□□ 0.69
Cln3Q61124 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cln3Q61124 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cln3Q61124 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cln3Q61124 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cln3Q61124 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cln3Q61124 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cln3Q61124 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Cln3Q61124 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cln3Q61124 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.38■□□□□ 0.69
Cln3Q61124 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
Cln3Q61124 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cln3Q61124 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cln3Q61124 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cln3Q61124 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cln3Q61124 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cln3Q61124 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cln3Q61124 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Cln3Q61124 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cln3Q61124 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cln3Q61124 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cln3Q61124 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cln3Q61124 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cln3Q61124 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cln3Q61124 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Gm9013-201ENSMUST00000132939 882 ntBASIC19.36■□□□□ 0.69
Cln3Q61124 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.36■□□□□ 0.69
Cln3Q61124 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.36■□□□□ 0.69
Cln3Q61124 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.36■□□□□ 0.69
Cln3Q61124 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cln3Q61124 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cln3Q61124 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.36■□□□□ 0.69
Cln3Q61124 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cln3Q61124 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cln3Q61124 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.36■□□□□ 0.69
Cln3Q61124 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln3Q61124 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cln3Q61124 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln3Q61124 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.35■□□□□ 0.69
Cln3Q61124 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Cln3Q61124 Gm17971-201ENSMUST00000190239 806 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms