Protein–RNA interactions for Protein: Q61068

Usp17la, Ubiquitin carboxyl-terminal hydrolase 17-like protein A, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp17laQ61068 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp17laQ61068 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp17laQ61068 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp17laQ61068 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp17laQ61068 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp17laQ61068 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Usp17laQ61068 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Usp17laQ61068 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Usp17laQ61068 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.59■□□□□ 0.57
Usp17laQ61068 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Usp17laQ61068 Il3ra-202ENSMUST00000223589 738 ntBASIC18.59■□□□□ 0.57
Usp17laQ61068 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.59■□□□□ 0.57
Usp17laQ61068 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp17laQ61068 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp17laQ61068 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp17laQ61068 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Usp17laQ61068 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Usp17laQ61068 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp17laQ61068 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.58■□□□□ 0.57
Usp17laQ61068 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp17laQ61068 Gm9731-201ENSMUST00000209480 747 ntBASIC18.58■□□□□ 0.56
Usp17laQ61068 Gm7370-201ENSMUST00000219471 767 ntBASIC18.58■□□□□ 0.56
Usp17laQ61068 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp17laQ61068 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.58■□□□□ 0.56
Usp17laQ61068 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp17laQ61068 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp17laQ61068 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp17laQ61068 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.57■□□□□ 0.56
Usp17laQ61068 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp17laQ61068 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp17laQ61068 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.57■□□□□ 0.56
Usp17laQ61068 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp17laQ61068 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp17laQ61068 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp17laQ61068 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp17laQ61068 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp17laQ61068 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Usp17laQ61068 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Usp17laQ61068 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Usp17laQ61068 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Gm10819-201ENSMUST00000099988 561 ntBASIC18.56■□□□□ 0.56
Usp17laQ61068 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Usp17laQ61068 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.56■□□□□ 0.56
Usp17laQ61068 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp17laQ61068 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.55■□□□□ 0.56
Usp17laQ61068 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp17laQ61068 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Usp17laQ61068 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp17laQ61068 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Idnk-204ENSMUST00000226010 1898 ntBASIC18.54■□□□□ 0.56
Usp17laQ61068 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp17laQ61068 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp17laQ61068 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp17laQ61068 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms