Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.91■□□□□ 0.3
ClpbQ60649 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.91■□□□□ 0.3
ClpbQ60649 Gm11927-201ENSMUST00000118472 759 ntBASIC16.91■□□□□ 0.3
ClpbQ60649 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClpbQ60649 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ClpbQ60649 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ClpbQ60649 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClpbQ60649 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
ClpbQ60649 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClpbQ60649 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClpbQ60649 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.9■□□□□ 0.3
ClpbQ60649 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ClpbQ60649 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClpbQ60649 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.9■□□□□ 0.3
ClpbQ60649 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
ClpbQ60649 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
ClpbQ60649 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClpbQ60649 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ClpbQ60649 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.9■□□□□ 0.3
ClpbQ60649 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClpbQ60649 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ClpbQ60649 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClpbQ60649 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.89■□□□□ 0.29
ClpbQ60649 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.89■□□□□ 0.29
ClpbQ60649 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ClpbQ60649 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.89■□□□□ 0.29
ClpbQ60649 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ClpbQ60649 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ClpbQ60649 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.89■□□□□ 0.29
ClpbQ60649 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClpbQ60649 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClpbQ60649 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClpbQ60649 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClpbQ60649 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClpbQ60649 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.88■□□□□ 0.29
ClpbQ60649 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ClpbQ60649 Zfp783-201ENSMUST00000095946 670 ntBASIC16.88■□□□□ 0.29
ClpbQ60649 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClpbQ60649 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClpbQ60649 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClpbQ60649 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ClpbQ60649 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClpbQ60649 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.87■□□□□ 0.29
ClpbQ60649 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.87■□□□□ 0.29
ClpbQ60649 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ClpbQ60649 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.87■□□□□ 0.29
ClpbQ60649 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ClpbQ60649 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ClpbQ60649 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.86■□□□□ 0.29
ClpbQ60649 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.86■□□□□ 0.29
ClpbQ60649 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.86■□□□□ 0.29
ClpbQ60649 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ClpbQ60649 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.86■□□□□ 0.29
ClpbQ60649 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClpbQ60649 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClpbQ60649 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClpbQ60649 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClpbQ60649 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClpbQ60649 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClpbQ60649 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms