Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav5d-4Q5R1F6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav5d-4Q5R1F6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5d-4Q5R1F6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5d-4Q5R1F6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5d-4Q5R1F6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav5d-4Q5R1F6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5d-4Q5R1F6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5d-4Q5R1F6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5d-4Q5R1F6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5d-4Q5R1F6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5d-4Q5R1F6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav5d-4Q5R1F6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Trav5d-4Q5R1F6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav5d-4Q5R1F6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Gm11927-201ENSMUST00000118472 759 ntBASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5d-4Q5R1F6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms