Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Idnk-204ENSMUST00000226010 1898 ntBASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gm26833-201ENSMUST00000180899 440 ntBASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gm40848-201ENSMUST00000221998 324 ntBASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav15-1-dv6-1Q5R1D2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms