Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf43Q5NCP0 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.94■□□□□ 0.46
Rnf43Q5NCP0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Gm13474-201ENSMUST00000122466 815 ntBASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf43Q5NCP0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf43Q5NCP0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Gm17661-201ENSMUST00000170317 270 ntBASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rnf43Q5NCP0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf43Q5NCP0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf43Q5NCP0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rnf43Q5NCP0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rnf43Q5NCP0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf43Q5NCP0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rnf43Q5NCP0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf43Q5NCP0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf43Q5NCP0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.9■□□□□ 0.46
Rnf43Q5NCP0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.89■□□□□ 0.46
Rnf43Q5NCP0 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf43Q5NCP0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms