Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Fst-202ENSMUST00000223640 2612 ntBASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps13aQ5H8C4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vps13aQ5H8C4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vps13aQ5H8C4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.52■□□□□ 0.39
Vps13aQ5H8C4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Vps13aQ5H8C4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps13aQ5H8C4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.51■□□□□ 0.39
Vps13aQ5H8C4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Gm23935-201ENSMUST00000102303 57 ntBASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Gm24270-201ENSMUST00000102326 57 ntBASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Gm24245-201ENSMUST00000157318 57 ntBASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Gm27702-201ENSMUST00000184512 56 ntBASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps13aQ5H8C4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vps13aQ5H8C4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms