Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Urb1Q571H0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Urb1Q571H0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Urb1Q571H0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Urb1Q571H0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Urb1Q571H0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Urb1Q571H0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Urb1Q571H0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Urb1Q571H0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Urb1Q571H0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.21■□□□□ 0.19
Urb1Q571H0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Urb1Q571H0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Gm16061-201ENSMUST00000122167 857 ntBASIC16.21■□□□□ 0.19
Urb1Q571H0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Urb1Q571H0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Urb1Q571H0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Urb1Q571H0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Urb1Q571H0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Urb1Q571H0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.2■□□□□ 0.18
Urb1Q571H0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Urb1Q571H0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Urb1Q571H0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Urb1Q571H0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Urb1Q571H0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Urb1Q571H0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.2■□□□□ 0.18
Urb1Q571H0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Urb1Q571H0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Urb1Q571H0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Urb1Q571H0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.19■□□□□ 0.18
Urb1Q571H0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Mir2861-201ENSMUST00000175539 82 ntBASIC16.19■□□□□ 0.18
Urb1Q571H0 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.19■□□□□ 0.18
Urb1Q571H0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.19■□□□□ 0.18
Urb1Q571H0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Urb1Q571H0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Urb1Q571H0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Urb1Q571H0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.19■□□□□ 0.18
Urb1Q571H0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Urb1Q571H0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Urb1Q571H0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Urb1Q571H0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Urb1Q571H0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Urb1Q571H0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.18■□□□□ 0.18
Urb1Q571H0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Urb1Q571H0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Urb1Q571H0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Urb1Q571H0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Urb1Q571H0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Urb1Q571H0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Urb1Q571H0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Urb1Q571H0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Gm7153-201ENSMUST00000117092 455 ntBASIC16.17■□□□□ 0.18
Urb1Q571H0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Urb1Q571H0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Urb1Q571H0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.17■□□□□ 0.18
Urb1Q571H0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Urb1Q571H0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.17■□□□□ 0.18
Urb1Q571H0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Urb1Q571H0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Urb1Q571H0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms